微生物学家

neuropixels-analysis.md ★ 2.2k

from "foryourhealth111-pixel"

Neuropixels neural recording analysis. Load SpikeGLX/OpenEphys data, preprocess, motion correction, Kilosort4 spike sorting, quality metrics, Allen/IBL curation

omero-integration.md ★ 2.2k

from "foryourhealth111-pixel"

Microscopy data management platform. Access images via Python, retrieve datasets, analyze pixels, manage ROIs/annotations, batch processing, for high-content sc

research-lookup.md ★ 1.8k

from "K-Dense-AI"

Look up current research information using the Parallel Chat API (primary) or Perplexity sonar-pro-search (academic paper searches). Automatically routes querie

tooluniverse-metagenomics-analysis.md ★ 1.4k

from "mims-harvard"

Microbiome and metagenomics analysis using MGnify, GTDB taxonomy, ENA sequencing data, and EuropePMC literature. Covers taxonomic classification, genome quality

tooluniverse-cell-line-profiling.md ★ 1.4k

from "mims-harvard"

Cancer cell-line selection and profiling for experimental model choice. Cross-references DepMap, Cellosaurus, COSMIC, PharmacoDB to deliver identity verificatio

tooluniverse-stem-cell-organoid.md ★ 1.4k

from "mims-harvard"

Research stem cells, iPSCs, organoids, and cell differentiation using ToolUniverse tools. Covers pluripotency marker identification, differentiation pathway ana

tooluniverse-metagenomics-analysis.md ★ 1.4k

from "mims-harvard"

Analyze microbiome and metagenomics data using MGnify, GTDB, ENA, and literature tools. Search studies by biome/keyword, retrieve taxonomic profiles and functio

microbiome-research.md ★ 1.4k

from "mims-harvard"

Analyze microbiome and metagenomics data using MGnify, GTDB, ENA, and literature tools. Search studies by biome/keyword, retrieve taxonomic profiles and functio

biomedical-search.md ★ 1.0k

from "wu-yc"

Complete biomedical information search combining PubMed, preprints, clinical trials, and FDA drug labels. Powered by Valyu semantic search.

biomni.md ★ 1.0k

from "wu-yc"

Autonomous biomedical AI agent framework for executing complex research tasks across genomics, drug discovery, molecular biology, and clinical analysis. Use thi

tooluniverse-metabolomics.md ★ 1.0k

from "wu-yc"

Comprehensive metabolomics research skill for identifying metabolites, analyzing studies, and searching metabolomics databases. Integrates HMDB (220k+ metabolit

fastqc-report-interpreter.md ★ 909

from "aipoch"

Use when analyzing FASTQC quality reports from sequencing data, identifying quality issues in NGS datasets, or troubleshooting sequencing problems. Interprets q

microbiome-diversity-reporter.md ★ 909

from "aipoch"

Interpret Alpha and Beta diversity metrics from 16S rRNA sequencing results.

flowio.md ★ 909

from "aipoch"

Parse Flow Cytometry Standard (FCS) files v2.0–3.1 and extract events/metadata for preprocessing workflows (e.g., when you need NumPy arrays, channel info, or C

metagenomic-krona-chart.md ★ 909

from "aipoch"

Analyze data with `metagenomic-krona-chart` using a reproducible workflow, explicit validation, and structured outputs for review-ready interpretation.